BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034F11LP1|AL429938
(848 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig823 1630 0.0
>3x_Contig823
Length = 3303
Score = 1630 bits (821), Expect = 0.0
Identities = 843/849 (99%), Gaps = 2/849 (0%)
Strand = Plus / Plus
Query: 1 aaacactgagatgaaataaaaagagcctacacaactcttttgttcctcttcatttgaact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 aaacactgagatgaaataaaaagagcctacacaactcttttgttcctcttcatttgaact 643
Query: 61 ttcaactaacttcttattgacggggagttctctatagccgaaattcattccatccttgac 120
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 644 ttcaactaacttcttattgacgggga-ttctctatagccgaaattcattccatccttgac 702
Query: 121 tgcggtcctgcttctcattattacgccaatc-cacttcgttatggacgggaattcaatac 179
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 703 tgcggtcctgcttctcattattacgccaatcacacttcgttatggacgggaattcaatac 762
Query: 180 cgcagatcacgcgatgtaatcacacaatacgaatcattaccctacctaaatcatcaaggg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763 cgcagatcacgcgatgtaatcacacaatacgaatcattaccctacctaaatcatcaaggg 822
Query: 240 ttccaacggccactgtggcgagaaacgaattagactctgcagaaccctccccccggtttc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 823 ttccaacggccactgtggcgagaaacgaattagactctgcagaaccctccccccggtttc 882
Query: 300 atgtttgaaacggactttttcacaatatggcaaccgaactttcttaggctgtgcaatgcg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 883 atgtttgaaacggactttttcacaatatggcaaccgaactttcttaggctgtgcaatgcg 942
Query: 360 actaaaaggattccgtactcgtacatcttgagagagcttataagacaatgactacaaaat 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 943 actaaaaggattccgtactcgtacatcttgagagagcttataagacaatgactacaaaat 1002
Query: 420 tcgagacggccaagagtcttatttccgcaaagaatcgaatcatcgggacgcttgtcttga 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1003 tcgagacggccaagagtcttatttccgcaaagaatcgaatcatcgggacgcttgtcttga 1062
Query: 480 atatatctttcggttcagccaagctttctaagaatgtatttacggatgtagtatagctac 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1063 atatatctttcggttcagccaagctttctaagaatgtatttacggatgtagtatagctac 1122
Query: 540 ttgttctccttcctcccctccatatttttgccacgtattgaaatgtttgaaaataataac 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1123 ttgttctccttcctcccctccatatttttgccacgtattgaaatgtttgaaaataataac 1182
Query: 600 agtcaaaaacgacaaccttaaagtattgaagtatactatcacgtgtgaatcatcgtggtg 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1183 agtcaaaaacgacaaccttaaagtattgaagtatactatcacgtgtgaatcatcgtggtg 1242
Query: 660 agtgctttcccccatttttgtctgttattatcacactgactagttacgcgttccacgagt 719
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1243 agtgctttcccccatttttgtctgtaattatcacactgactagttacgcgttccacgagt 1302
Query: 720 aaaccgacgtgcatgtgcttyaacagcgacayaatacagacaatctcattaaaaaagtaa 779
|||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||
Sbjct: 1303 aaaccgacgtgcatgtgcttcaacagcgacacaatacagacaatctcattaaaaaagtaa 1362
Query: 780 ctaaactaaattaatcagtcgctttggcattcgtagagaatataagtcccgcccaaaaga 839
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1363 ctaaactaaattaatcagtcgctttggcattcgtagagaatataagtcccgcccaagaga 1422
Query: 840 atcgtagtt 848
|||||||||
Sbjct: 1423 atcgtagtt 1431
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5089
Number of Sequences: 1807
Number of extensions: 5089
Number of successful extensions: 32
Number of sequences better than 1.0e-20: 1
length of query: 848
length of database: 10,358,551
effective HSP length: 16
effective length of query: 832
effective length of database: 10,329,639
effective search space: 8594259648
effective search space used: 8594259648
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)